piaso

• piaso module
  • addNonOverlappingPeaks()
  • buildADJ()
  • calculateAdjacentPeakSimilarityChunkwindow()
  • calculateCellMetrics()
  • calculatePeakMetrics()
  • check_software_availability()
  • chr_split_func()
  • convertBamToFragment()
  • createCOSGDataFrameLong()
  • filterFragmentByBarcode()
  • filterFragmentByRegion()
  • filterFragments()
  • generateBigWigByCellType()
  • handler()
  • intersectPeak()
  • intersectPeakSlop()
  • loadFragmentAsTile()
  • match_and_retrieve_values()
  • mergeFragmentFiles()
  • mergePeakFile()
  • minusPeak()
  • parsePeak()
  • processTSSbed()
  • process_celltype()
  • process_fragment_file()
  • quantifyPeakActivity()
  • runMACS2()
  • runMACS2Parallel()
  • runMFE()
  • runSVD()
  • run_tfidf()
  • saveBEDFromArray()
  • sortBED()
  • sortBamByCBCoords()
  • sortDictByKeys()