piaso package

PIASO: Precise Integrative Analysis for Single-cell Omics

Subpackages

• piaso.plotting package
  • plot_features_violin()
  • plot_embeddings_split()
  • createCustomCmapFromHex()
• piaso.preprocessing package
  • getCrossCategories()
  • table()
• piaso.tools package
  • leiden_local()
  • infog()
  • score()
  • calculateScoreParallel()
  • calculateScoreParallel_multiBatch()
  • predictCellTypeByGDR()
  • runCOSGParallel()
  • runGDR()
  • runGDRParallel()
  • runSVD()
  • runSVDLazy()
  • smoothCellTypePrediction()
  • predictCellTypeByMarker()